update
This commit is contained in:
chaos
parent
d2da9e1af4
commit
235d7874e5
2
run.sh
2
run.sh
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@ -9,7 +9,7 @@ JQ=${JQ:-jq}
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export JQ_FLAVOR=${JQ_FLAVOR:-${JQ}}
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run() {
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${JQ} -rn -L "$(realpath .)" -L "$(realpath lib)" -L "$(realpath dropins)/${JQ_FLAVOR}" \
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${JQ} -nr -L "$(realpath .)" -L "$(realpath ./lib)" -L "$(realpath ./dropins)/${JQ_FLAVOR}" \
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--slurpfile exportFile "${EXPORT_FILE:-export.json}" \
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'include "main"; main' \
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--args -- "$@"
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203
tool/journalLib.jq
Normal file
203
tool/journalLib.jq
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@ -0,0 +1,203 @@
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import "utils" as utils;
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def calculateIngestionDose($customUnits):
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. as $ingestion |
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if .customUnitId != null then
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($customUnits | map(select(.id == $ingestion.customUnitId))[0]) as $customUnit |
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.dose * $customUnit.dose | . as $dose |
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$dose * 100 | round / 100
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else
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.dose
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end;
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def ingestionUnit($customUnits):
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. as $ingestion |
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if .customUnitId != null then
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($customUnits | map(select(.id == $ingestion.customUnitId))[0]) as $customUnit |
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$customUnit.originalUnit
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else
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.units
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end;
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def ingestionConsumerName:
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. as $ingestion |
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$ingestion.consumerName // "default";
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def filterIngestions($substanceFilter; $consumerFilter):
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. as $ingestions |
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if (($substanceFilter // [] | length) > 0) then
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[
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$ingestions[] as $ingestion |
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if
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([$substanceFilter[] | . == $ingestion.substanceName] | any)
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and
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([$consumerFilter[] | . == ($ingestion | ingestionConsumerName)] | any)
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then $ingestion
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else null end
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] | map(select(. != null))
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else $ingestions end;
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def ingestionsSubstanceNames:
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. as $ingestions |
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[$ingestions[].substanceName] | utils::orderedUnique;
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def ingestionsConsumerNames:
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. as $ingestions |
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[$ingestions[] | ingestionConsumerName] | utils::orderedUnique;
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def ingestionsByConsumer:
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. as $ingestions |
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($ingestions | ingestionsConsumerNames) as $consumerNames |
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[
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$consumerNames[] as $consumerName |
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{
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key: $consumerName,
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value: [$ingestions | map(select(
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. | ingestionConsumerName == $consumerName
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))],
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}
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] | from_entries;
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def experienceStats($customUnits):
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. as $experience |
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$experience.ingestions as $ingestions |
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(reduce $ingestions[] as $ingestion ({}; . as $stats |
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$ingestion |
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.substanceName as $name |
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.administrationRoute as $administrationRoute |
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. | calculateIngestionDose($customUnits) as $dose |
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. | ingestionUnit($customUnits) as $unit |
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. | ingestionConsumerName as $consumerName |
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$stats | .[$consumerName].[$name].[$administrationRoute] |=
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($stats.[$consumerName].[$name].[$administrationRoute] // {
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unit: "",
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# null because null+null = null for ingestions with unknown dose which .dose is null
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dose: null
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}) |
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.[$consumerName].[$name].[$administrationRoute].unit |= $unit |
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.[$consumerName].[$name].[$administrationRoute].dose += $dose
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));
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def statsCalculateCombinedDose($substanceName; $consumerName):
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. as $stats |
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(.[$consumerName].[$substanceName] | [to_entries[] | .value.dose] | add) as $combinedDose |
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(.[$consumerName].[$substanceName] | to_entries[0] | .value.unit) as $combinedDoseUnit |
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{dose: $combinedDose, unit: $combinedDoseUnit};
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def experiencesWithExtraData($customUnits):
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. as $experiences |
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(reduce $experiences[] as $experience ([];
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($experience | experienceStats($customUnits)) as $stats |
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. += [{
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$stats,
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$experience
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}]
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));
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def filterSortExperiences($customUnits; $substanceFilter; $consumerFilter; $sortMethod; $sortOptions):
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. as $experiences |
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($consumerFilter // ["default"]) as $consumerFilter |
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$sortOptions |
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# If filtering results by substances but no sortOptions.substanceName is defined, use the first one as a default
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(.substanceName |=
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if
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$sortOptions.substanceName == null
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and
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(($substanceFilter | length) >= 1)
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then
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$substanceFilter[0]
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else
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null
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end
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) | . as $sortOptions |
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$sortOptions | (.ingestionMethod |= ($sortOptions.ingestionMethod // "ORAL")) | . as $sortOptions |
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$sortOptions | (.consumerName |= ($sortOptions.consumerName // "default")) | . as $sortOptions |
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def sortFilter:
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def oldToNewSort: .experience.sortDate;
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def highestCombinedDoseSort: .stats.[$sortOptions.consumerName].[$sortOptions.substanceName] | [to_entries[] | .value.dose] | add;
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def highestMethodDoseSort: .stats.[$sortOptions.consumerName].[$sortOptions.substanceName].[$sortOptions.ingestionMethod // "ORAL"].dose;
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def filterBySubstanceFilter:
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. as $experiencesData |
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[
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$experiencesData[] as $experienceData |
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($experienceData.experience.ingestions) as $ingestions |
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if ($experienceData.experience.ingestions |
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any(
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. as $ingestion |
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$substanceFilter |
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any(index($ingestion.substanceName))
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)
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) then $experienceData else null end
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] | map(select(. != null));
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def filterByConsumerFilter:
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. as $experiencesData |
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(reduce $experiencesData[] as $experienceData ([];
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($experienceData.experience.ingestions) as $ingestions |
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. +=
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if ($experienceData.experience.ingestions |
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any(
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(. | ingestionConsumerName) as $consumerName |
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$consumerFilter |
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any(index($consumerName))
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)
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) then [$experienceData] else [] end
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));
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def filterBySubstanceAndConsumer:
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. as $experiencesData |
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(reduce $experiencesData[] as $experienceData ([];
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($experienceData.experience.ingestions) as $ingestions |
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. +=
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if
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($experienceData.experience.ingestions |
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any(
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.substanceName == $sortOptions.substanceName
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and
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(. | ingestionConsumerName) == $sortOptions.consumerName
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))
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then [$experienceData] else [] end
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));
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def filterByIngestionMethodForSubstance:
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. as $experiencesData | filterBySubstanceAndConsumer as $experiencesData |
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(reduce $experiencesData[] as $experienceData ([];
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($experienceData.experience.ingestions) as $ingestions |
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. += if ($experienceData.experience.ingestions | any(.substanceName == $sortOptions.substanceName and .administrationRoute == $sortOptions.ingestionMethod))
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then [$experienceData] else [] end
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));
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# speeds up by excluding everything not containing substances & consumers not in filters, wouldn't show any data anyway
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if $substanceFilter != null then filterBySubstanceFilter end |
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filterByConsumerFilter |
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if
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$sortMethod == "old-to-new" or $sortMethod == null
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then
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sort_by(oldToNewSort)
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elif
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$sortMethod == "highest-combined-dose"
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then
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utils::assert($sortOptions.substanceName != null; "substanceName not provided as sortOption") |
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filterBySubstanceAndConsumer |
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sort_by(highestCombinedDoseSort, oldToNewSort) |
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reverse
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elif
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$sortMethod == "highest-dose-for-method"
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then
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utils::assert($sortOptions.substanceName != null; "substanceName not provided as sortOption") |
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filterByIngestionMethodForSubstance |
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sort_by(highestMethodDoseSort, oldToNewSort) |
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reverse
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end;
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$experiences |
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experiencesWithExtraData($customUnits) |
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sortFilter;
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def experienceByTitle($name):
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utils::assert((. | type) == "array"; "experienceByTitle takes a array of experiences as input") |
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map(select(.title == $name))[0];
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@ -1,33 +1,18 @@
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include "dropins";
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include "utils";
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import "lib/stringLib" as stringLib;
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import "journalLib" as journalLib;
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def formatExperienceTitle:
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. as $experience |
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"\"\(.title)\": \(.creationDate / 1000 | strftime("%d-%m-%Y"))";
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def calculateIngestionDose($customUnits):
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. as $ingestion |
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if .customUnitId != null then
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($customUnits | map(select(.id == $ingestion.customUnitId))[0]) as $customUnit |
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.dose * $customUnit.dose | . as $dose |
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$dose * 100 | round / 100
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else
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.dose
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end;
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def ingestionUnit($customUnits):
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. as $ingestion |
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if .customUnitId != null then
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($customUnits | map(select(.id == $ingestion.customUnitId))[0]) as $customUnit |
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$customUnit.originalUnit
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else
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.units
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end;
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def formatIngestionDose($customUnits):
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. as $ingestion |
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. | calculateIngestionDose($customUnits) as $dose |
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. | ingestionUnit($customUnits) as $unit |
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. | journalLib::calculateIngestionDose($customUnits) as $dose |
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. | journalLib::ingestionUnit($customUnits) as $unit |
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$customUnits | map(select(.id == $ingestion.customUnitId))[0] as $customUnit |
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if $ingestion.dose == null then
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"Unknown"
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@ -50,7 +35,7 @@ def formatIngestionROA($customUnits; $substitutions):
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then
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$substitutions | .[$roa]
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else
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$roa | titleCase
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$roa | stringLib::titleCase
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end) as $roaText |
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$ingestion.customUnitId as $customUnitId |
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@ -63,64 +48,5 @@ def formatIngestionROA($customUnits; $substitutions):
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$customUnits | map(select(.id == $customUnitId))[0] as $customUnit |
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"\($roaText) (\($customUnit.name))"
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end;
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def formatIngestionROA($customUnits): formatIngestionROA($customUnits; {});
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def filterIngestions($substanceFilter; $consumerFilter):
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. as $ingestions |
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$ingestions | if (($substanceFilter // [] | length) > 0) then
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(reduce .[] as $ingestion ([];
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if
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([$substanceFilter[] | . == $ingestion.substanceName] | any)
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and
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([$consumerFilter[] | . == ifNullDefault($ingestion.consumerName; "default")] | any)
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then . += [$ingestion]
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else . end)
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)
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end;
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def ingestionsByConsumer:
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. as $ingestions |
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(reduce $ingestions[] as $ingestion ({};
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ifNullDefault($ingestion.consumerName; "default") as $consumerName |
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if .[$consumerName] == null then .[$consumerName] |= [] end |
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.[$consumerName] += [$ingestion]
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));
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def ingestionsSubstanceNames:
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. as $ingestions |
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[$ingestions[].substanceName] | orderedUnique;
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def ingestionsConsumerNames:
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. as $ingestions |
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[$ingestions[] as $ingestion | ifNullDefault($ingestion.consumerName; "default")] | orderedUnique;
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def experienceStats($customUnits):
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. as $experience |
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$experience.ingestions as $ingestions |
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(reduce $ingestions[] as $ingestion ({}; . as $stats |
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$ingestion |
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.substanceName as $name |
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.administrationRoute as $administrationRoute |
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. | calculateIngestionDose($customUnits) as $dose |
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. | ingestionUnit($customUnits) as $unit |
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(.consumerName // "default") as $consumerName |
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$stats | .[$consumerName].[$name].[$administrationRoute] |=
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($stats.[$consumerName].[$name].[$administrationRoute] // {
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unit: "",
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# null because null+null = null for ingestions with unknown dose which .dose is null
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dose: null
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}) |
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.[$consumerName].[$name].[$administrationRoute].unit |= $unit |
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.[$consumerName].[$name].[$administrationRoute].dose += $dose
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));
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def calculateCombinedDose($substanceName; $consumerName):
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. as $stats |
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(.[$consumerName].[$substanceName] | [to_entries[] | .value.dose] | add) as $combinedDose |
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(.[$consumerName].[$substanceName] | to_entries[0] | .value.unit) as $combinedDoseUnit |
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{dose: $combinedDose, unit: $combinedDoseUnit};
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def experienceByTitle($name):
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assert((. | type) == "array"; "experienceByTitle takes a array of experiences as input") |
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map(select(.title == $name))[0];
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10
tool/lib/stringLib.jq
Normal file
10
tool/lib/stringLib.jq
Normal file
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@ -0,0 +1,10 @@
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def titleCase:
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[splits("\\b") | select(length>0)]
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| map((.[:1]|ascii_upcase) + (.[1:] |ascii_downcase))
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| join("");
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def lpad(string;len;fill):
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if len == 0 then string else (fill * len)[0:len] + string end;
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def rpad(string;len;fill):
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if len == 0 then string else string + (fill * len)[0:len] end;
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84
tool/lib/tableLib.jq
Normal file
84
tool/lib/tableLib.jq
Normal file
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@ -0,0 +1,84 @@
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import "stringLib" as stringLib;
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def printPrettyTable($title; $columnTitles; $rows):
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if [$rows[] | length] | unique | length > 1 then error("non-even number of columns") end |
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$title | if . == null then "" end | . as $title |
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" | " as $numColumnseperator |
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def padRow($numColumns; $maxColumnLengths):
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. as $row |
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[
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range($numColumns) as $columnNumber |
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$row[$columnNumber] as $content |
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if $columnNumber == 0 then
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stringLib::lpad($content; $maxColumnLengths[$columnNumber] - ($content | length) ; " ")
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else
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stringLib::rpad($content; $maxColumnLengths[$columnNumber] - ($content | length) ; " ")
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end
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];
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([$rows[] | length] | unique[0]) as $numColumns |
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([$columnTitles | length] | unique[0]) as $numColumnTitles |
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if $numColumns != $numColumnTitles then error("unequal title rows and columns") end |
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[$columnTitles[] | length] as $maxColumnLengths |
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(reduce $rows[] as $column ($maxColumnLengths;
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[
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range($numColumns) as $columnNumber |
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[
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.[$columnNumber],
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($column[$columnNumber] | length)
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] | max
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]
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)) as $maxColumnLengths |
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$columnTitles |
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padRow($numColumns; $maxColumnLengths) |
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join($numColumnseperator) as $columnTitleRow |
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[$rows[] | padRow($numColumns; $maxColumnLengths)] as $rows |
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$title | length as $titleLength |
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((($numColumns - 1) * ($numColumnseperator | length)) + ($maxColumnLengths | add)) as $maxRowLength |
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[
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$maxRowLength,
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$titleLength
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] | max as $maxLength |
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# Pad title to be centered to maximum row length
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$title | if $titleLength < $maxRowLength then
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stringLib::lpad($title; ($maxLength - $titleLength) / 2; " ")
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end | . as $title |
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# if title is longer than maximum row length, pad the first row the difference between them
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if $titleLength > $maxRowLength then
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[
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$rows[] as $row |
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[
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stringLib::lpad($row[0]; $titleLength - $maxRowLength; " ")
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] + $row[1:]
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]
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else $rows end | . as $rows |
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($rows | map(join($numColumnseperator))) as $rows |
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if $title != "" then
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[
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$title,
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([range($maxLength) | "-"] | join("")),
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$columnTitleRow,
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([range($maxLength) | "-"] | join("")),
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$rows
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] | flatten | join("\n") + "\n"
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else
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[
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$columnTitleRow,
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$rows
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] | flatten | join("\n") + "\n"
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end;
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@ -57,6 +57,8 @@ def ensureNullOr(ensureType):
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def ensureKey($type; $key): if (. | has($key) | not) then typeError("\($type):\($key)") end;
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def ensureKey($value; $type; $key): $value | ensureKey($type; $key);
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def ensureIfKey($key; ensureType): if (. | has($key)) then .[$key] | ensureType end;
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def ensureWrapError($newType; ensureType):
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. as $value |
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try (. | ensureType)
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@ -69,7 +71,6 @@ def ensureWrapError($newType; ensureType):
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def ensureWrapError($value; $newType; ensureType):
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$value | ensureWrapError($newType; ensureType);
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# JQ_TYPECHECKING=true required for tests
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def typeLibTests:
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testLib::expectPassed(testLib::runTest(
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|
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226
tool/main.jq
226
tool/main.jq
|
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@ -2,25 +2,30 @@ include "dropins";
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import "lib/typeLib" as typeLib;
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import "lib/argsLib" as argsLib;
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import "lib/stringLib" as stringLib;
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import "lib/tableLib" as tableLib;
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include "utils";
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include "journalUtils";
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import "journalLib" as journalLib;
|
||||
import "journalUtils" as journalUtils;
|
||||
import "types" as types;
|
||||
import "utils" as utils;
|
||||
|
||||
|
||||
def printExperienceStats($stats; $substanceFilter; $consumerFilter; $withTitle):
|
||||
. as $experience |
|
||||
|
||||
($consumerFilter // ["default"]) as $consumerFilter |
|
||||
|
||||
$experience.ingestions | filterIngestions($substanceFilter; $consumerFilter) as $ingestions |
|
||||
($ingestions | ingestionsByConsumer) as $ingestionsByConsumer |
|
||||
$experience.ingestions |
|
||||
journalLib::filterIngestions($substanceFilter; $consumerFilter) as $ingestions |
|
||||
($ingestions | journalLib::ingestionsByConsumer) as $ingestionsByConsumer |
|
||||
|
||||
($ingestionsByConsumer | keys) as $consumerNames |
|
||||
|
||||
"" as $experienceStatsText |
|
||||
$experienceStatsText |
|
||||
if $withTitle then
|
||||
. += ($experience | formatExperienceTitle | . + "\n")
|
||||
. += ($experience | journalUtils::formatExperienceTitle | . + "\n")
|
||||
end | . as $experienceStatsText |
|
||||
|
||||
reduce $consumerNames[] as $consumerName ($experienceStatsText;
|
||||
|
|
@ -45,16 +50,16 @@ def printExperienceStats($stats; $substanceFilter; $consumerFilter; $withTitle):
|
|||
|
||||
$substanceStats |
|
||||
.key as $ingestionMethod |
|
||||
ifNullDefault(.value.dose; "Unknown") as $dose |
|
||||
(.value.dose // "Unknown") as $dose |
|
||||
.value.unit as $unit |
|
||||
|
||||
($experienceStatsText | . += "Dose (\($ingestionMethod | titleCase)): \($dose) \($unit)\n") as $experienceStatsText |
|
||||
($experienceStatsText | . += "Dose (\($ingestionMethod | stringLib::titleCase)): \($dose) \($unit)\n") as $experienceStatsText |
|
||||
$experienceStatsText
|
||||
) | . as $experienceStatsText |
|
||||
|
||||
$experienceStatsText | if ($ingestionMethods | length > 1) then
|
||||
($stats | calculateCombinedDose($substanceName; $consumerName)) as $combinedDose |
|
||||
. += "Combined Dose: \(ifNullDefault($combinedDose.dose; "Unknown")) \($combinedDose.unit)\n"
|
||||
($stats | journalLib::statsCalculateCombinedDose($substanceName; $consumerName)) as $combinedDose |
|
||||
. += "Combined Dose: \($combinedDose.dose // "Unknown") \($combinedDose.unit)\n"
|
||||
end | . as $experienceStatsText |
|
||||
|
||||
$experienceStatsText | . += "\n"
|
||||
|
|
@ -65,167 +70,41 @@ def printExperienceLog($customUnits; $substanceFilter; $consumerFilter; $pretty;
|
|||
. as $experience |
|
||||
($consumerFilter // ["default"]) as $consumerFilter |
|
||||
|
||||
$experience.ingestions | sort_by(.sortDate) | filterIngestions($substanceFilter; $consumerFilter) as $ingestions |
|
||||
$experience.ingestions |
|
||||
sort_by(.sortDate) |
|
||||
journalLib::filterIngestions($substanceFilter; $consumerFilter) as $ingestions |
|
||||
|
||||
$ingestions | ingestionsConsumerNames as $consumerNames |
|
||||
$ingestions | journalLib::ingestionsConsumerNames as $consumerNames |
|
||||
|
||||
if ($consumerNames == ["default"])
|
||||
then
|
||||
if ($consumerNames != ["default"]) then
|
||||
["Substance", "Dose", "ROA", "Consumer", "Time"]
|
||||
else
|
||||
["Substance", "Dose", "ROA", "Time"]
|
||||
end | . as $columnTitles |
|
||||
|
||||
(reduce $ingestions[] as $ingestion ([]; . as $rows |
|
||||
$ingestion |
|
||||
.substanceName as $substanceName |
|
||||
ifNullDefault(.consumerName; "default") as $consumerName |
|
||||
formatIngestionDose($customUnits) as $doseText |
|
||||
formatIngestionROA($customUnits) as $roaText |
|
||||
formatIngestionTime as $timeText |
|
||||
$rows | . += [
|
||||
[
|
||||
$ingestions[] as $ingestion |
|
||||
$ingestion |
|
||||
.substanceName as $substanceName |
|
||||
journalLib::ingestionConsumerName as $consumerName |
|
||||
journalUtils::formatIngestionDose($customUnits) as $doseText |
|
||||
journalUtils::formatIngestionROA($customUnits) as $roaText |
|
||||
journalUtils::formatIngestionTime as $timeText |
|
||||
if ($consumerNames != ["default"])
|
||||
then [$substanceName, $doseText, $roaText, $consumerName, $timeText]
|
||||
else [$substanceName, $doseText, $roaText, $timeText] end
|
||||
]
|
||||
)) as $rows |
|
||||
] as $rows |
|
||||
|
||||
if $pretty then
|
||||
printPrettyTable(
|
||||
if $withTitle then ($experience | formatExperienceTitle) else null end;
|
||||
$columnTitles;
|
||||
$rows
|
||||
)
|
||||
else
|
||||
$rows | map(join(" | ")) | rtrimstr(" ") as $rows |
|
||||
(if $withTitle then [$experience | formatExperienceTitle] else [] end) + $rows | join("\n")
|
||||
end | . as $ingestionLog |
|
||||
tableLib::printPrettyTable(
|
||||
if $withTitle then ($experience | journalUtils::formatExperienceTitle) else null end;
|
||||
$columnTitles;
|
||||
$rows
|
||||
);
|
||||
|
||||
$ingestionLog;
|
||||
|
||||
def printExperiencesAdvanced($customUnits; $substanceFilter; $consumerFilter; $sortMethod; $sortOptions; $sortFilterString; sortFilter):
|
||||
def printExperiences($customUnits; $substanceFilter; $consumerFilter):
|
||||
. as $experiences |
|
||||
($consumerFilter // ["default"]) as $consumerFilter |
|
||||
$sortOptions |
|
||||
# If filtering results by substances but no sortOptions.substanceName is defined, use the first one as a default
|
||||
(.substanceName |=
|
||||
if
|
||||
$sortOptions.substanceName == null
|
||||
and
|
||||
(($substanceFilter | length) >= 1)
|
||||
then
|
||||
$substanceFilter[0]
|
||||
else
|
||||
null
|
||||
end
|
||||
) | . as $sortOptions |
|
||||
$sortOptions | (.ingestionMethod |= ($sortOptions.ingestionMethod // "ORAL")) | . as $sortOptions |
|
||||
$sortOptions | (.consumerName |= ($sortOptions.consumerName // "default")) | . as $sortOptions |
|
||||
|
||||
def sortFilterExperiences:
|
||||
def oldToNewSort: .experience.sortDate;
|
||||
def highestCombinedDoseSort: .stats.[$sortOptions.consumerName].[$sortOptions.substanceName] | [to_entries[] | .value.dose] | add;
|
||||
def highestMethodDoseSort: .stats.[$sortOptions.consumerName].[$sortOptions.substanceName].[$sortOptions.ingestionMethod // "ORAL"].dose;
|
||||
|
||||
def filterBySubstanceFilter:
|
||||
. as $experiencesData |
|
||||
(reduce $experiencesData[] as $experienceData ([];
|
||||
($experienceData.experience.ingestions) as $ingestions |
|
||||
. +=
|
||||
if ($experienceData.experience.ingestions |
|
||||
any(
|
||||
.substanceName as $substanceName |
|
||||
$substanceFilter |
|
||||
any(index($substanceName))
|
||||
)
|
||||
) then [$experienceData] else [] end
|
||||
));
|
||||
|
||||
def filterByConsumerFilter:
|
||||
. as $experiencesData |
|
||||
(reduce $experiencesData[] as $experienceData ([];
|
||||
($experienceData.experience.ingestions) as $ingestions |
|
||||
. +=
|
||||
if ($experienceData.experience.ingestions |
|
||||
any(
|
||||
ifNullDefault(.consumerName; "default") as $consumerName |
|
||||
$consumerFilter |
|
||||
any(index($consumerName))
|
||||
)
|
||||
) then [$experienceData] else [] end
|
||||
));
|
||||
|
||||
def filterBySubstanceAndConsumer:
|
||||
. as $experiencesData |
|
||||
(reduce $experiencesData[] as $experienceData ([];
|
||||
($experienceData.experience.ingestions) as $ingestions |
|
||||
. +=
|
||||
if
|
||||
($experienceData.experience.ingestions |
|
||||
any(
|
||||
.substanceName == $sortOptions.substanceName
|
||||
and
|
||||
ifNullDefault(.consumerName; "default") == $sortOptions.consumerName
|
||||
))
|
||||
then [$experienceData] else [] end
|
||||
));
|
||||
|
||||
def filterByIngestionMethodForSubstance:
|
||||
. as $experiencesData | filterBySubstanceAndConsumer as $experiencesData |
|
||||
(reduce $experiencesData[] as $experienceData ([];
|
||||
($experienceData.experience.ingestions) as $ingestions |
|
||||
. += if ($experienceData.experience.ingestions | any(.substanceName == $sortOptions.substanceName and .administrationRoute == $sortOptions.ingestionMethod))
|
||||
then [$experienceData] else [] end
|
||||
));
|
||||
|
||||
# speeds up by excluding everything not containing substances & consumers not in filters, wouldn't show any data anyway
|
||||
if $substanceFilter != null then filterBySubstanceFilter end |
|
||||
filterByConsumerFilter |
|
||||
|
||||
if
|
||||
$sortMethod == "old-to-new" or $sortMethod == null
|
||||
then
|
||||
sort_by(oldToNewSort)
|
||||
elif
|
||||
$sortMethod == "highest-combined-dose"
|
||||
then
|
||||
assert($sortOptions.substanceName != null; "substanceName not provided as sortOption") |
|
||||
filterBySubstanceAndConsumer |
|
||||
sort_by(highestCombinedDoseSort, oldToNewSort) |
|
||||
reverse
|
||||
elif
|
||||
$sortMethod == "highest-dose-for-method"
|
||||
then
|
||||
assert($sortOptions.substanceName != null; "substanceName not provided as sortOption") |
|
||||
filterByIngestionMethodForSubstance |
|
||||
sort_by(highestMethodDoseSort, oldToNewSort) |
|
||||
reverse
|
||||
end;
|
||||
|
||||
def sortFilterFromString($filterString):
|
||||
(reduce ($filterString | split("|"))[] as $filter (.;
|
||||
if
|
||||
$filter == "reverse" then . | reverse
|
||||
elif ($filter | startswith("firstN")) then
|
||||
($filter | ltrimstr("firstN(") | rtrimstr(")")) as $arg |
|
||||
. | firstN($arg | try fromjson catch error("invalid number passed to firstN"))
|
||||
end
|
||||
));
|
||||
|
||||
def experiencesWithExtraData($customUnits):
|
||||
. as $experiences |
|
||||
(reduce $experiences[] as $experience ([];
|
||||
. += [{
|
||||
stats: $experience | experienceStats($customUnits),
|
||||
$experience
|
||||
}]
|
||||
));
|
||||
|
||||
$experiences |
|
||||
experiencesWithExtraData($customUnits) |
|
||||
sortFilterExperiences |
|
||||
if ($sortFilterString != null) then . | sortFilterFromString($sortFilterString) end |
|
||||
if (sortFilter != null) then . | sortFilter end |
|
||||
.[] as $entry |
|
||||
$entry.experience as $experience |
|
||||
$entry.stats as $stats |
|
||||
|
|
@ -248,7 +127,7 @@ def printExperiencesAdvanced($customUnits; $substanceFilter; $consumerFilter; $s
|
|||
def main:
|
||||
def usage:
|
||||
[
|
||||
"psychonaut_journal_stats {printExperience,printExperiencesAdvanced}",
|
||||
"psychonaut_journal_stats {printExperience,printExperiences}",
|
||||
""
|
||||
] | join("\n") | halt_error(1);
|
||||
|
||||
|
|
@ -269,7 +148,7 @@ def main:
|
|||
def printExperienceUsage($reason):
|
||||
[
|
||||
$reason,
|
||||
"Usage: printExperience [experienceTitle] --pretty=bool --title=bool --stats=bool --substance-filter=[substanceNames,] --consumer-filter=[consumerNames,]",
|
||||
"Usage: printExperience [experienceTitle] --title=bool --stats=bool --substance-filter=[substanceNames,] --consumer-filter=[consumerNames,]",
|
||||
""
|
||||
] | map(select(. != null)) | join("\n") | halt_error(1);
|
||||
|
||||
|
|
@ -282,7 +161,6 @@ def main:
|
|||
{
|
||||
substanceFilter: null,
|
||||
consumerFilter: null,
|
||||
pretty: true,
|
||||
withTitle: true,
|
||||
withStats: true,
|
||||
} as $defaultOptions |
|
||||
|
|
@ -292,14 +170,11 @@ def main:
|
|||
$longArg.key as $arg |
|
||||
$longArg.value as $value |
|
||||
|
||||
if $arg == "pretty" then
|
||||
.pretty |= (ifNullDefault($value; $defaultOptions.pretty) | argsLib::parseArgBool)
|
||||
end |
|
||||
if $arg == "title" then
|
||||
.withTitle |= (ifNullDefault($value; $defaultOptions.withTitle) | argsLib::parseArgBool)
|
||||
.withTitle |= ($value // $defaultOptions.withTitle | argsLib::parseArgBool)
|
||||
end |
|
||||
if $arg == "stats" then
|
||||
.withStats |= (ifNullDefault($value; $defaultOptions.withStats) | argsLib::parseArgBool)
|
||||
.withStats |= ($value // $defaultOptions.withStats | argsLib::parseArgBool)
|
||||
end |
|
||||
if $arg == "substance-filter" then
|
||||
.substanceFilter |= ($parsedArgs.longArgs.["substance-filter"] | split(","))
|
||||
|
|
@ -309,7 +184,7 @@ def main:
|
|||
end
|
||||
)) | . as $options |
|
||||
|
||||
$exportData.experiences | experienceByTitle($experienceTitle) as $experience |
|
||||
$exportData.experiences | journalLib::experienceByTitle($experienceTitle) as $experience |
|
||||
if $experience == null then error("Experience not found") end |
|
||||
|
||||
($experience | printExperienceLog(
|
||||
|
|
@ -321,7 +196,7 @@ def main:
|
|||
)) as $ingestionLog |
|
||||
|
||||
if $options.withStats then
|
||||
($experience | experienceStats($exportData.customUnits)) as $stats |
|
||||
($experience | journalLib::experienceStats($exportData.customUnits)) as $stats |
|
||||
$ingestionLog +
|
||||
"\n\nCumulative Doses:\n" +
|
||||
($experience | printExperienceStats(
|
||||
|
|
@ -333,16 +208,16 @@ def main:
|
|||
else
|
||||
$ingestionLog
|
||||
end
|
||||
elif $program == "printExperiencesAdvanced" then
|
||||
def printExperiencesAdvancedUsage($reason):
|
||||
elif $program == "printExperiences" then
|
||||
def printExperiencesUsage($reason):
|
||||
[
|
||||
$reason,
|
||||
"Usage: printExperiencesAdvanced --substance-filter=[substanceNames,] --consumer-filter=[consumerNames,] --sort-method={old-to-new,highest-combined-dose,highest-dose-for-method} --sort-option-substance-name=[string] --sort-options-ingestion-method=[string] --sort-options-consumer-name=[string] --sort-filter={firstN(x),reverse}",
|
||||
"Usage: printExperiences --substance-filter=[substanceNames,] --consumer-filter=[consumerNames,] --sort-method={old-to-new,highest-combined-dose,highest-dose-for-method} --sort-option-substance-name=[string] --sort-options-ingestion-method=[string] --sort-options-consumer-name=[string] --sort-filter={firstN(x),reverse}",
|
||||
""
|
||||
] | map(select(. != null)) | join("\n") | halt_error(1);
|
||||
|
||||
if any($parsedArgs.shortArgs[]; . == "h") then printExperiencesAdvancedUsage(null) end |
|
||||
if ($parsedArgs.longArgs | has("help")) then printExperiencesAdvancedUsage(null) end |
|
||||
if any($parsedArgs.shortArgs[]; . == "h") then printExperiencesUsage(null) end |
|
||||
if ($parsedArgs.longArgs | has("help")) then printExperiencesUsage(null) end |
|
||||
|
||||
{
|
||||
substanceFilter: null,
|
||||
|
|
@ -380,13 +255,18 @@ def main:
|
|||
)) | . as $options |
|
||||
|
||||
$exportData.experiences |
|
||||
printExperiencesAdvanced(
|
||||
journalLib::filterSortExperiences(
|
||||
$exportData.customUnits;
|
||||
$options.substanceFilter;
|
||||
$options.consumerFilter;
|
||||
$options.sortMethod;
|
||||
$options.sortOptions;
|
||||
$options.sortFilter; null
|
||||
$options.sortOptions
|
||||
) |
|
||||
if ($options.sortFilter != null) then utils::sortFilterFromString($options.sortFilter) end |
|
||||
printExperiences(
|
||||
$exportData.customUnits;
|
||||
$options.substanceFilter;
|
||||
$options.consumerFilter
|
||||
)
|
||||
else
|
||||
usage
|
||||
|
|
|
|||
|
|
@ -4,27 +4,71 @@ import "lib/typeLib" as typeLib;
|
|||
|
||||
#["DEBUG:",{"creationDate":"number","ingestions":[{"administrationRoute":"string","consumerName":"null","creationDate":"number","customUnitId":"null","dose":"number","estimatedDoseStandardDeviation":"null","isDoseAnEstimate":"boolean","notes":"string","stomachFullness":"null","substanceName":"string","time":"number","units":"string"}],"isFavorite":"boolean","location":"null","ratings":"array:empty/unknown","sortDate":"number","text":"string","timedNotes":"array:empty/unknown","title":"string"}]
|
||||
|
||||
def ensureAdministrationRoute:
|
||||
. as $administrationRoute |
|
||||
if typeLib::typecheckingEnabled then
|
||||
[
|
||||
"ORAL",
|
||||
"SUBLINGUAL",
|
||||
"BUCCAL",
|
||||
"INSUFFLATED",
|
||||
"RECTAL",
|
||||
"TRANSDERMAL",
|
||||
"SUBCUTANEOUS",
|
||||
"INTRAMUSCULAR",
|
||||
"INTRAVENOUS",
|
||||
"SMOKED",
|
||||
"INHALED"
|
||||
] | any(index($administrationRoute))
|
||||
end;
|
||||
|
||||
def ensureIngestion:
|
||||
. as $ingestion |
|
||||
typeLib::ensureObject |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "substanceName") |
|
||||
.substanceName | typeLib::ensureWrapError("experience:substanceName"; typeLib::ensureString);
|
||||
|
||||
def ensureTimedNote:
|
||||
. as $timedNote |
|
||||
if typeLib::typecheckingEnabled then
|
||||
$timedNote | typeLib::ensureObject |
|
||||
$timedNote | typeLib::ensureKey("timedNote"; "color") |
|
||||
$timedNote.color | typeLib::ensureWrapError("timedNote:color"; typeLib::ensureString) |
|
||||
$timedNote | typeLib::ensureKey("timedNote"; "creationDate") |
|
||||
$timedNote.creationDate | typeLib::ensureWrapError("timedNote:creationDate"; typeLib::ensureNumber) |
|
||||
$timedNote | typeLib::ensureKey("timedNote"; "isPartOfTimeline") |
|
||||
$timedNote.isPartOfTimeline | typeLib::ensureWrapError("timedNote:isPartOfTimeline"; typeLib::ensureBool) |
|
||||
$timedNote | typeLib::ensureKey("timedNote"; "note") |
|
||||
$timedNote.note | typeLib::ensureWrapError("timedNote:note"; typeLib::ensureString) |
|
||||
$timedNote | typeLib::ensureKey("timedNote"; "time") |
|
||||
$timedNote.time | typeLib::ensureWrapError("timedNote:time"; typeLib::ensureNumber)
|
||||
typeLib::ensureObject |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "substanceName") |
|
||||
.substanceName | typeLib::ensureWrapError("experience:substanceName"; typeLib::ensureString) |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "time") |
|
||||
.time | typeLib::ensureWrapError("experience:time"; typeLib::ensureNumber) |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "creationDate") |
|
||||
.creationDate | typeLib::ensureWrapError("experience:creationDate"; typeLib::ensureNumber) |
|
||||
|
||||
# TODO: check routes
|
||||
$ingestion |
|
||||
typeLib::ensureKey("ingestion"; "administrationRoute") |
|
||||
$ingestion.administrationRoute |
|
||||
typeLib::ensureWrapError("experience:administrationRoute"; typeLib::ensureString) |
|
||||
$ingestion.administrationRoute |
|
||||
ensureAdministrationRoute |
|
||||
|
||||
typeLib::ensureWrapError(
|
||||
"experience:dose";
|
||||
$ingestion | typeLib::ensureIfKey("dose"; typeLib::ensureNullOr(typeLib::ensureNumber))
|
||||
) |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "isDoseAnEstimate") |
|
||||
.isDoseAnEstimate | typeLib::ensureWrapError("experience:isDoseAnEstimate"; typeLib::ensureBool) |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "units") |
|
||||
.units | typeLib::ensureWrapError("experience:units"; typeLib::ensureString) |
|
||||
|
||||
$ingestion | typeLib::ensureKey("ingestion"; "notes") |
|
||||
.notes | typeLib::ensureWrapError("experience:notes"; typeLib::ensureString) |
|
||||
|
||||
typeLib::ensureWrapError(
|
||||
"experience:stomachFullness";
|
||||
$ingestion | typeLib::ensureIfKey("stomachFullness"; typeLib::ensureNullOr(typeLib::ensureString))
|
||||
) |
|
||||
|
||||
typeLib::ensureWrapError(
|
||||
"experience:customUnitId";
|
||||
$ingestion | typeLib::ensureIfKey("customUnitId"; typeLib::ensureNullOr(typeLib::ensureNumber))
|
||||
) |
|
||||
|
||||
$ingestion
|
||||
end;
|
||||
|
||||
def ensureExperience:
|
||||
|
|
@ -44,17 +88,11 @@ def ensureExperience:
|
|||
$experience | typeLib::ensureKey("experience"; "sortDate") |
|
||||
$experience.sortDate | typeLib::ensureWrapError("experience:sortDate"; typeLib::ensureNumber) |
|
||||
|
||||
$experience | typeLib::ensureKey("experience"; "isFavorite") |
|
||||
$experience.isFavorite | typeLib::ensureWrapError("experience:isFavorite"; typeLib::ensureBool) |
|
||||
|
||||
$experience | typeLib::ensureKey("experience"; "timedNotes") |
|
||||
$experience.timedNotes | typeLib::ensureWrapError("experience:timedNotes"; typeLib::ensureArray) |
|
||||
(reduce $experience.timedNotes[] as $timedNote (null; $timedNote | ensureTimedNote)) |
|
||||
|
||||
$experience | typeLib::ensureKey("experience"; "ingestions") |
|
||||
$experience.ingestions | typeLib::ensureWrapError("experience:ingestions"; typeLib::ensureArray) |
|
||||
(reduce $experience.ingestions[] as $ingestion (null; $ingestion | ensureIngestion))
|
||||
(reduce $experience.ingestions[] as $ingestion (null; $ingestion | ensureIngestion)) |
|
||||
|
||||
$experience
|
||||
end;
|
||||
|
||||
def ensureExportData:
|
||||
|
|
|
|||
107
tool/utils.jq
107
tool/utils.jq
|
|
@ -1,5 +1,7 @@
|
|||
include "dropins";
|
||||
|
||||
import "stringLib" as stringLib;
|
||||
|
||||
def debugLog($target; $value):
|
||||
if
|
||||
($ENV["JQ_DEBUG"] == $target)
|
||||
|
|
@ -14,27 +16,8 @@ def debugLog($target; $value):
|
|||
def assert(cond; $msg): if cond then . else error($msg) end;
|
||||
def assert($loc; cond; $msg): assert(cond; "\($loc.file):\($loc.line): " + $msg);
|
||||
|
||||
def titleCase:
|
||||
[splits("\\b") | select(length>0)]
|
||||
| map((.[:1]|ascii_upcase) + (.[1:] |ascii_downcase))
|
||||
| join("");
|
||||
|
||||
def lpad(string;len;fill):
|
||||
if len == 0 then string else (fill * len)[0:len] + string end;
|
||||
|
||||
def rpad(string;len;fill):
|
||||
if len == 0 then string else string + (fill * len)[0:len] end;
|
||||
|
||||
def firstN($n): .[:$n];
|
||||
|
||||
# only use when // does not suffice
|
||||
def ifNullDefault($value; $default):
|
||||
if $value != null then
|
||||
$value
|
||||
else
|
||||
$default
|
||||
end;
|
||||
|
||||
def orderedUnique:
|
||||
(reduce .[] as $value ([];
|
||||
if
|
||||
|
|
@ -43,81 +26,11 @@ def orderedUnique:
|
|||
else . end
|
||||
));
|
||||
|
||||
def printPrettyTable($title; $columnTitles; $rows):
|
||||
if [$rows[] | length] | unique | length > 1 then error("non-even number of columns") end |
|
||||
$title | if . == null then "" end | . as $title |
|
||||
|
||||
" | " as $columnSeperator |
|
||||
([$rows[] | length] | unique[0] // 0) as $columns |
|
||||
[$rows[] as $columns | [$columns[] | length]] as $columnLengths |
|
||||
|
||||
(reduce $columnLengths[] as $lengths ([range($columns) | 0];
|
||||
[range($columns) as $columnNumber | [.[$columnNumber], $lengths[$columnNumber]] | max]
|
||||
)) as $maxColumnLengths |
|
||||
|
||||
(reduce $columnLengths[] as $lengths ($maxColumnLengths;
|
||||
[range($columns) as $columnNumber | [.[$columnNumber], ($columnTitles[$columnNumber] | length)] | max]
|
||||
)) as $maxColumnLengths |
|
||||
|
||||
(reduce range($columns) as $columnNumber ([];
|
||||
$columnTitles[$columnNumber] as $title |
|
||||
. += [
|
||||
if $columnNumber == 0 then
|
||||
lpad($title; $maxColumnLengths[$columnNumber] - ($title | length) ; " ")
|
||||
else
|
||||
rpad($title; $maxColumnLengths[$columnNumber] - ($title | length) ; " ")
|
||||
end
|
||||
]
|
||||
)) | join($columnSeperator) as $columnTitleRow |
|
||||
|
||||
(reduce $rows[] as $row ([];
|
||||
. += [(reduce range($columns) as $columnNumber ([]; . += [
|
||||
$row[$columnNumber] as $column |
|
||||
|
||||
if $columnNumber == 0 then
|
||||
lpad($column; $maxColumnLengths[$columnNumber] - ($column | length) ; " ")
|
||||
else
|
||||
rpad($column; $maxColumnLengths[$columnNumber] - ($column | length) ; " ")
|
||||
end
|
||||
]))]
|
||||
)) as $rows |
|
||||
|
||||
$title | length as $titleLength |
|
||||
|
||||
((($columns - 1) * ($columnSeperator | length)) + ($maxColumnLengths | add)) as $maxRowLength |
|
||||
[
|
||||
$maxRowLength,
|
||||
$titleLength
|
||||
] | max as $maxLength |
|
||||
|
||||
# Pad title to be centered to maximum row length
|
||||
$title | if $titleLength < $maxRowLength then
|
||||
lpad($title; ($maxLength - $titleLength) / 2; " ")
|
||||
end | . as $title |
|
||||
|
||||
# if title is longer than maximum row length, pad the first row the difference between them
|
||||
$rows | if $titleLength > $maxRowLength then
|
||||
(reduce .[] as $row ([];
|
||||
. += [
|
||||
[
|
||||
lpad($row[0]; $titleLength - $maxRowLength; " ")
|
||||
] + $row[1:]
|
||||
]
|
||||
))
|
||||
end | . as $rows |
|
||||
|
||||
($rows | map(join($columnSeperator))) as $rows |
|
||||
if $title != null then
|
||||
[
|
||||
$title,
|
||||
([range($maxLength) | "-"] | join("")),
|
||||
$columnTitleRow,
|
||||
([range($maxLength) | "-"] | join("")),
|
||||
$rows
|
||||
] | flatten | join("\n") + "\n"
|
||||
else
|
||||
[
|
||||
$columnTitleRow,
|
||||
$rows
|
||||
] | flatten | join("\n") + "\n"
|
||||
end;
|
||||
def sortFilterFromString($filterString):
|
||||
($filterString | split("|")).[] as $filter |
|
||||
if
|
||||
$filter == "reverse" then . | reverse
|
||||
elif ($filter | startswith("firstN")) then
|
||||
($filter | ltrimstr("firstN(") | rtrimstr(")")) as $arg |
|
||||
. | firstN($arg | try fromjson catch error("invalid number passed to firstN"))
|
||||
end;
|
||||
Loading…
Reference in a new issue